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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Identical Sequence Group
Metagenomic characterization of a wastewater treatment plant (SRP000180)
[ 100 % / within this phylotype ]
Number of tRNA clusters
T
C
A
G
T
phe
AAA
0
Ser
AGA
1
Tyr
ATA
0
Cys
ACA
0
T
GAA
5
GGA
4
GTA
5
GCA
4
C
Leu
TAA
11
TGA
8
ochre
TTA
0
opal Sec
TCA
4
A
CAA
10
CGA
7
amber
CTA
0
Trp
CCA
4
G
C
Leu
AAG
1
Pro
AGG
0
His
ATG
0
Arg
ACG
4
T
GAG
6
GGG
2
GTG
6
GCG
1
C
TAG
6
TGG
5
Gln
TTG
8
TCG
2
A
CAG
5
CGG
6
CTG
3
CCG
3
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
4
GGT
4
GTT
9
GCT
3
C
TAT
0
TGT
4
Lys
TTT
5
Arg
TCT
7
A
Met
CAT
11
CGT
3
CTT
4
CCT
10
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
3
GGC
3
GTC
0
GCC
2
C
TAC
5
TGC
3
Glu
TTC
11
TCC
4
A
CAC
4
CGC
1
CTC
2
CCC
3
G
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