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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Identical Sequence Group
Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
[ 100 % ]
Number of tRNA clusters
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
3
GGA
1
GTA
8
GCA
1
C
Leu
TAA
1
TGA
2
ochre
TTA
0
opal Sec
TCA
0
A
CAA
1
CGA
0
amber
CTA
0
Trp
CCA
4
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
1
T
GAG
0
GGG
4
GTG
1
GCG
0
C
TAG
3
TGG
4
Gln
TTG
4
TCG
1
A
CAG
0
CGG
0
CTG
0
CCG
2
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
2
GGT
2
GTT
2
GCT
3
C
TAT
0
TGT
2
Lys
TTT
3
Arg
TCT
2
A
Met
CAT
6
CGT
1
CTT
0
CCT
4
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
2
GGC
1
GTC
5
GCC
2
C
TAC
1
TGC
1
Glu
TTC
3
TCC
5
A
CAC
1
CGC
1
CTC
0
CCC
2
G
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