The detailed information of tRNA gene sequence


Sequence ID>W1710785705
Genome IDLJIC01000022
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodopseudomonas sp. AAP120 [LJIC]
Start position on genome 71196
End posion on genome 71272
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaggtttaa
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCAGAGGTTCAAA
TCCTCTCCCCGCAACCA
Downstream region at tRNA end position 
aatcgaaccc
Secondary structure (Cloverleaf model)
>W1710785705	Met	CAT
                   a      ACCA aatcgaaccc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A G A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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