The detailed information of tRNA gene sequence


Sequence ID>W1710790774
Genome IDLJNA01000045
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSyntrophobacter sp. DG_60 [LJNA]
Start position on genome 255
End posion on genome 352
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atcctatatt
tRNA gene sequence 
GGAAGCGGATGGCTCCTGGTGGGGCCCCTGGACTTCAAATCCAGTGTTCGGCACGCAGTG
GTGTCGAGGGTGGGTTCAATTCCCATACGCTTCCGCCA
Downstream region at tRNA end position 
agcattttta
Secondary structure (Cloverleaf model)
>W1710790774	SeC(p)	TCA
                   t      GCCA agcattttta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    A     T A C C C     A
      T C C        T      + | | | |     A
    G       T C G G       G T G G G     C
    G       + | | |                 T T
    T       G G C C
      G G          C     TGTTCGGCACGCAGTGGTGTCGAGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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