The detailed information of tRNA gene sequence


Sequence ID>W1710791387
Genome IDLJNR01000318
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospira bacterium SG8_3 [LJNR]
Start position on genome 6218
End posion on genome 6293
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatagttttg
tRNA gene sequence 
GGGCCCATAGCTCAGCTGGAAGAGCCACCGGCTCATAACCGGTAGGTCCCTGGTTCGAAC
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
ccccttattt
Secondary structure (Cloverleaf model)
>W1710791387	Met	CAT
                   g      ACCA ccccttattt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     G G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      A A          C     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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