The detailed information of tRNA gene sequence


Sequence ID>W1710798458
Genome IDLJTM01000137
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospira bacterium SG8_35_4 [LJTM]
Start position on genome 1927
End posion on genome 2012
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aattcaatct
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGACGAAGGCGACGGTCTTGAAAACCGTAGAGCGAAAGCTCCGT
GGGTTCGAATCCTACCTCCTCCGCCA
Downstream region at tRNA end position 
cttgtctgct
Secondary structure (Cloverleaf model)
>W1710798458	Ser	TGA
                   t      GCCA cttgtctgct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      C G A        G     AGAGCGAAAGCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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