The detailed information of tRNA gene sequence


Sequence ID>W1710798462
Genome IDLJTM01000200
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospira bacterium SG8_35_4 [LJTM]
Start position on genome 5712
End posion on genome 5806
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
caataagtta
tRNA gene sequence 
GGGAGTGTATAGGGTTCTGGTGTCCCTCCCGGACTTCAAATCCGGTGTTGCCTACCACAA
GTGGGCAGGGTGGGTTCGATTCCCACACGCTCCCAtca
Downstream region at tRNA end position 
tcacttcgta
Secondary structure (Cloverleaf model)
>W1710798462	SeC(p)	TCA
                   a      Atca tcacttcgta
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     T - A          T T
                    A     C A C C C     A
      C T T        T      | | | | |     G
    T       G G G A       G T G G G     C
    G       | | | |                 T T
    G       C C C T
      T G T        C     TGTTGCCTACCACAAGTGGGCAGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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