The detailed information of tRNA gene sequence


Sequence ID>W1710799055
Genome IDLJUG01000060
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospira bacterium SM23_35 [LJUG]
Start position on genome 5416
End posion on genome 5339
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caccagatgc
tRNA gene sequence 
GTCCCCATCGTCTAGCTCGGCCTAGGACATCGCCCTTTCAAGGCGGTAACACGGGTTCAA
ATCCCGTTGGGGACGCCA
Downstream region at tRNA end position 
attttttcat
Secondary structure (Cloverleaf model)
>W1710799055	Glu	TTC
                   c      GCCA attttttcat
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
    T C G A        C      | | | | |     A
  C         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    C C T A        A     TAAC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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