The detailed information of tRNA gene sequence


Sequence ID>W1710799425
Genome IDLJUR01000189
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium SM23_61 [LJUR]
Start position on genome 2911
End posion on genome 2818
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttattacgc
tRNA gene sequence 
GGAGAGATGCCCGAGCTGGCCGATGGGGCACGACTGGAAATCGTGTGTTCTGCCAAAAGC
GGAACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
taaaagcttg
Secondary structure (Cloverleaf model)
>W1710799425	Ser	GGA
                   c      GCCA taaaagcttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C C       G A G G G     C
  G         + | | |                 T T
  C         T G G G
    C G A          G     TGTTCTGCCAAAAGCGGAACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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