The detailed information of tRNA gene sequence


Sequence ID>W1710799744
Genome IDLJVB01000002
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillales bacterium SM1_46 [LJVB]
Start position on genome 38756
End posion on genome 38846
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acagttttct
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTCGAAGGAGCACGACTGGAAATCGTGTATACGGCAAAACCGT
ATCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtccaaagaa
Secondary structure (Cloverleaf model)
>W1710799744	Ser	GGA
                   t      GCCA gtccaaagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TATACGGCAAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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