The detailed information of tRNA gene sequence


Sequence ID>W1710799777
Genome IDLJVB01000122
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillales bacterium SM1_46 [LJVB]
Start position on genome 6789
End posion on genome 6880
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attcgatccc
tRNA gene sequence 
GGAGAGATGGCCGAGCTGGTCGAAGGCGCACCCCTGCTAAGGGTGTATACGCCAAAAGCG
TATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gaattgaatg
Secondary structure (Cloverleaf model)
>W1710799777	Ser	GCT
                   c      GCCA gaattgaatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TATACGCCAAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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