The detailed information of tRNA gene sequence


Sequence ID>W1710799866
Genome IDLJVF01000061
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPhycisphaerae bacterium SM1_79 [LJVF]
Start position on genome 1130
End posion on genome 1038
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catattactC
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCTTAAGGTAACGGTTTGCTAAACCGTCGTGGGGGTATACGCC
CCCACCGCGGGTTCGAATCCCGCCCTCTCCGTta
Downstream region at tRNA end position 
cattttgact
Secondary structure (Cloverleaf model)
>W1710799866	Ser	GCT
                   C      GTta cattttgact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G C G G G     C
    G         | | |                 T T
    C       A G G T
      T T A        A     CGTGGGGGTATACGCCCCCACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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