The detailed information of tRNA gene sequence


Sequence ID>W1710821627
Genome IDLKTU01000016
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus [LKTU]
Start position on genome 142883
End posion on genome 142959
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaaggcttgt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGAAGGTTCGAA
TCCTTTCGCCCCGACCA
Downstream region at tRNA end position 
agaatcttgt
Secondary structure (Cloverleaf model)
>W1710821627	Pro	TGG
                   t      ACCA agaatcttgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T T T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G A A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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