The detailed information of tRNA gene sequence


Sequence ID>W1710821681
Genome IDLKTV01000026
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus [LKTV]
Start position on genome 71928
End posion on genome 72004
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttcgcaccat
tRNA gene sequence 
CGGGGTGTAGCTTAGCCTGGTAGAGCGCTACGTTCGGGACGTAGAGGCCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
gtcttttcga
Secondary structure (Cloverleaf model)
>W1710821681	Pro	CGG
                   t      ACCA gtcttttcga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       T T C G       G G A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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