The detailed information of tRNA gene sequence


Sequence ID>W131010891
Genome IDAHYV01000008
Search identical group
Phylum/ClassBacillota
SpeciesEnterococcus avium ATCC 14025 [AHYV]
Start position on genome 35862
End posion on genome 35766
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
attttgtttc
tRNA gene sequence 
GGGAGTGGATGGGTTCTGGTGTTCCCTCTGGTCTTCAAAACCAGTATGAGGAGTTAGGAG
CTTCTTGGGTAGGTTCGATTCCTACACATTCCCGCCA
Downstream region at tRNA end position 
attaaactat
Secondary structure (Cloverleaf model)
>W131010891	SeC(p)	TCA
                   c      GCCA attaaactat
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G   A          T T
                    A     C A T C C     A
      T C T        T      | | | | |     G
    G       T G G G       G T A G G     C
    G         | | |                 T T
    T       T C C C
      G T          T     TATGAGGAGTTAGGAGCTTCTTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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