The detailed information of tRNA gene sequence


Sequence ID>W1710891882
Genome IDLNDC01000169
Search identical group
Phylum/ClassCyanobacteriota
SpeciesGeitlerinema sp. PCC 9228 [LNDC]
Start position on genome 12289
End posion on genome 12361
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taatactgga
tRNA gene sequence 
CCAGGGTTGGCCGAGCGGTTTAGGCAGCGAACTCATAATTCGCCTCAGGCAGGTTCAACT
CCTGCACCCTGGAttt
Downstream region at tRNA end position 
tcgcctagct
Secondary structure (Cloverleaf model)
>W1710891882	Met	CAT
                   a      Attt tcgcctagct
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T C
                    T     C G T C C     A
      C G A        G      | | | | |     A
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T T          A     CTCAG
                    G - C
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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