The detailed information of tRNA gene sequence


Sequence ID>W1710893027
Genome IDLNEI01000019
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium Ga0077534 [LNEI]
Start position on genome 19018
End posion on genome 19115
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
caaattatcc
tRNA gene sequence 
GGAGGCGCGGCTTGTCCGGTGATGGGCACGGTCTTCAAAACCGTTGTGAGGGCGCGAGAG
CGTACTCAGGTGGGTTCGACTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
atttagtgaa
Secondary structure (Cloverleaf model)
>W1710893027	SeC(p)	TCA
                   c      GCCA atttagtgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C   A          T C
                    G     C A C C C     A
      C C T        G      | | | | |     G
    G       G T T C       G T G G G     C
    G       + + + |                 T T
    T       T G G G
      G A          C     TGTGAGGGCGCGAGAGCGTACTCAG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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