The detailed information of tRNA gene sequence


Sequence ID>W1710893241
Genome IDLNEO01000053
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium Ga0077539 [LNEO]
Start position on genome 25235
End posion on genome 25140
Amino Acid Pseudo
Anticodon GCT
Upstream region at tRNA start position 
catgttctct
tRNA gene sequence 
GGAGGGTATGTGCATCGCGGTCTGCACACCATTCTGCTAAACTGGGACGCCGAGAAAAAA
TCGGCGCAGTCGGTTCGACTCCGGCACCCTCCGCCG
Downstream region at tRNA end position 
atcgctcgcg
Secondary structure (Cloverleaf model)
>W1710893241	Pseudo	GCT
                   t      GCCG atcgctcgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T C
                    A     C G G C C     A
    G C T A        T      | + | | |     G
  C         C G T G       G T C G G     C
  G         | | | |                 T T
  G         G C A C
    T C T          A     GACGCCGAGAAAAAATCGGCGCA
                    C - G
                    C - G
                    A - T
                    T   C
                    T - A
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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