The detailed information of tRNA gene sequence


Sequence ID>W1710893865
Genome IDLNFE01000149
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium Ga0077553 [LNFE]
Start position on genome 4768
End posion on genome 4674
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtttaattgc
tRNA gene sequence 
GGAAGCCACGCTTGGCCGGTGCTGGGCCTGGTCTTCAAAACCAGTGTGCGTCGCGTAAGC
GGCGCGGTGGGTTCGACTCCCACTGGCTTCCGCCA
Downstream region at tRNA end position 
ccccatcccc
Secondary structure (Cloverleaf model)
>W1710893865	SeC(p)	TCA
                   c      GCCA ccccatcccc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     C - G
                     A - T          T C
                    C     C A C C C     A
      C C G        G      | | | | |     G
    G       G T T C       G T G G G     C
    G       + + + |                 T T
    T       T G G G
      G C          C     TGTGCGTCGCGTAAGCGGCGCG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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