The detailed information of tRNA gene sequence


Sequence ID>W1710909635
Genome IDLNQR01000043
Search identical group
Phylum/ClassNitrospirota
SpeciesCandidatus Magnetominusculus xianensis HCH-1 [LNQR]
Start position on genome 11357
End posion on genome 11447
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggcagaaaT
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTCGAAGGCAGCCGCCTGCTAAGCGGTTGTGGGGGTAATACTC
CACCCAGGGTTCGAATCCCTGCCTCTCCGGtt
Downstream region at tRNA end position 
attttaacct
Secondary structure (Cloverleaf model)
>W1710909635	Ser	GCT
                   T      GGtt attttaacct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     TGTGGGGGTAATACTCCACC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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