The detailed information of tRNA gene sequence


Sequence ID>W1710917275
Genome IDLNVX01000284
Search identical group
Phylum/ClassElusimicrobiota
SpeciesCandidatus Endomicrobium trichonymphae [LNVX]
Start position on genome 347
End posion on genome 253
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatatgatat
tRNA gene sequence 
GGAGGGGTCGCATAGTAGGTCTAGTGCGCTGGTTTGCTAAACCGGTGTGCGGACATAAAA
GTCCGTACCGAGAGTTCGAATCTCTCCCCCTCCGCtt
Downstream region at tRNA end position 
tgatttttac
Secondary structure (Cloverleaf model)
>W1710917275	Ser	GCT
                   t      GCtt tgatttttac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C T C     A
    A T G A        C      | | | | |     G
  G         T A C G       G A G A G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TGTGCGGACATAAAAGTCCGTACC
                    C - G
                    T + G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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