The detailed information of tRNA gene sequence


Sequence ID>W1710925642
Genome IDLODK01000027
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas sp. H100 [LODK]
Start position on genome 169439
End posion on genome 169363
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccttcaatgt
tRNA gene sequence 
CGGCGATTAGCGCAGTTTGGTAGCGCACTTGGTTTGGGTCCAAGGGGTCGCAGGTTCAAA
TCCTGCATCGCCGACCA
Downstream region at tRNA end position 
ttttcttatt
Secondary structure (Cloverleaf model)
>W1710925642	Pro	TGG
                   t      ACCA ttttcttatt
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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