The detailed information of tRNA gene sequence


Sequence ID>W1710944278
Genome IDLOQI01000010
Search identical group
Phylum/ClassFusobacteriota
SpeciesOceanivirga salmonicida [LOQI]
Start position on genome 17600
End posion on genome 17504
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
attgaaaaac
tRNA gene sequence 
GGGAGTGGATGAGTTCTGGTGTTCTCTCTGGTCTTCAAAACCAGCATGAGGGGTTAAGAG
CCTCTTAGGTGGGTTCGATTCCCACACATTCCCGCCA
Downstream region at tRNA end position 
atactttaaa
Secondary structure (Cloverleaf model)
>W1710944278	SeC(p)	TCA
                   c      GCCA atactttaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       T G A G       G T G G G     C
    G         | | |                 T T
    T       T C T C
      G T          T     CATGAGGGGTTAAGAGCCTCTTAG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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