The detailed information of tRNA gene sequence


Sequence ID>W131036236
Genome IDALVJ01000023
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCalothrix sp. PCC 7103 [ALVJ]
Start position on genome 404756
End posion on genome 404844
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tataaaaccT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGATGGTGACGCACTCGAAATGCGTTTTGGCAGCAATGTCA
ACGGGGGTTCGAATCCCCCCCTCTCCGAtt
Downstream region at tRNA end position 
attccttgta
Secondary structure (Cloverleaf model)
>W131036236	Ser	CGA
                   T      GAtt attccttgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G       + | |                   T T
    T       T G G T
      T G A        G     TTTGGCAGCAATGTCAAC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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