The detailed information of tRNA gene sequence


Sequence ID>W131036259
Genome IDALVJ01000037
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCalothrix sp. PCC 7103 [ALVJ]
Start position on genome 150277
End posion on genome 150191
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggcccattgt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTAAAGCGTCCTCCTGCTAAGAGGAAGTAGGTAGCAATATCTA
CCGAGGGTTCGATCCCCTCTCTCTCCTaat
Downstream region at tRNA end position 
caatgcccat
Secondary structure (Cloverleaf model)
>W131036259	Ser	GCT
                   t      Taat caatgcccat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          C T
                    T     C T C C C     A
        G A        G      | | | | |     G
      T     G T C G       G A G G G     C
      G       | | |                 T T
      G     A A G C
        T A        G     AGTAGGTAGCAATATCTACC
                    T - A
                    C - G
                    C - G
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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