The detailed information of tRNA gene sequence


Sequence ID>W131036273
Genome IDALVJ01000039
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCalothrix sp. PCC 7103 [ALVJ]
Start position on genome 476841
End posion on genome 476769
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
gtttagtcaa
tRNA gene sequence 
CCAGGGTTGGCCGATCGGTTTAGGCAACGAACTCATAATTCGTCCCAGACAGGTTCAACT
CCTGTACCCTGGAttt
Downstream region at tRNA end position 
agtaaaaatt
Secondary structure (Cloverleaf model)
>W131036273	Pseudo	CAT
                   a      Attt agtaaaaatt
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T C
                    T     T G T C C     A
      C T A        G      | | | | |     A
    G       G C C G       A C A G G     C
    G         | | |                 T T
    T       A G G C
      T T          A     CCCAG
                    A - T
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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