The detailed information of tRNA gene sequence


Sequence ID>W1710986651
Genome IDLPUF01000003
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesMethyloprofundus sedimenti [LPUF]
Start position on genome 177293
End posion on genome 177204
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagctcttac
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGCCGAAAGCGGCGGTCTTGAAAACCGTTGAGGGTTTATCCCCT
CCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
tgaataagtg
Secondary structure (Cloverleaf model)
>W1710986651	Ser	TGA
                   c      GCCA tgaataagtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TGAGGGTTTATCCCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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