The detailed information of tRNA gene sequence


Sequence ID>W1710991218
Genome IDLPXN01000002
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOceanibaculum pacificum [LPXN]
Start position on genome 52234
End posion on genome 52160
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cgcatggaat
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGGAGAGCACTACGTTGACATCGTAGGGGTCACAGGTTCAATCC
CTGTCGCGCCCACCA
Downstream region at tRNA end position 
ttcccccctc
Secondary structure (Cloverleaf model)
>W1710991218	Val	GAC
                   t      ACCA ttcccccctc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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