The detailed information of tRNA gene sequence


Sequence ID>W131066008
Genome IDANOG01000020
Search identical group
Phylum/ClassPlanctomycetota
SpeciesRhodopirellula maiorica SM1 [ANOG]
Start position on genome 5668
End posion on genome 5741
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcacccacaa
tRNA gene sequence 
GGCGATGTAGCTCAGTCGGTTAGAGCGGAGTCTTCATAAGGCTTAGGTCAGCGGTTCGAG
TCCGCTCATCGCTAttt
Downstream region at tRNA end position 
tcataatctc
Secondary structure (Cloverleaf model)
>W131066008	Met	CAT
                   a      Attt tcataatctc
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C G C C     A
      T G A        A      | | | | |     G
    C       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G + T
                    A - T
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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