The detailed information of tRNA gene sequence


Sequence ID>W1711018961
Genome IDLQXI01000016
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas haloplanktis [LQXI]
Start position on genome 67073
End posion on genome 67165
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataatgcgtc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCCGAAGGAGCTCCCCTGCTAAGGGAGTATAGAGTTTGTAGCT
CTATCGAGGGTTCGAATCCCTCCCTCTCCACCA
Downstream region at tRNA end position 
ttactgaata
Secondary structure (Cloverleaf model)
>W1711018961	Ser	GCT
                   c      ACCA ttactgaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TATAGAGTTTGTAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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