The detailed information of tRNA gene sequence


Sequence ID>W1711033811
Genome IDLRID01000056
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesJanthinobacterium sp. HH107 [LRID]
Start position on genome 21177
End posion on genome 21269
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taatcagcta
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCCGAAGGCACATCCCTGCTAAGGATGCATACGGCTTATACCT
GTATCGTGGGTTCGAATCCCACCGTCTCCGCCA
Downstream region at tRNA end position 
gaatcaaata
Secondary structure (Cloverleaf model)
>W1711033811	Ser	GCT
                   a      GCCA gaatcaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        A     CATACGGCTTATACCTGTATC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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