The detailed information of tRNA gene sequence


Sequence ID>W131104172
Genome IDAPBO01000061
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfobulbus sp. oral taxon 041 oral taxon 041 str. Dsb3 [APBO]
Start position on genome 3210
End posion on genome 3125
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atccccgcct
tRNA gene sequence 
GGAGGGATGGCCGAGCGGTTGAAGGCGGCGGTCTTGAAAACCGTTGTGCGCAAGCACCGT
GGGTTCGAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
cgaggcccgg
Secondary structure (Cloverleaf model)
>W131104172	Ser	TGA
                   t      GCCA cgaggcccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      C G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTGCGCAAGCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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