The detailed information of tRNA gene sequence


Sequence ID>W131104173
Genome IDAPBO01000061
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfobulbus sp. oral taxon 041 oral taxon 041 str. Dsb3 [APBO]
Start position on genome 3096
End posion on genome 3005
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgatttttcg
tRNA gene sequence 
GGAGAGATGACCGAGAGGCCGATGGTGCTCGCCTGCTAAGCGAGTGTGGGGGTTATACTC
CACCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tatgaaaaag
Secondary structure (Cloverleaf model)
>W131104173	Ser	GCT
                   g      GCCA tatgaaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     A
    G       G C C A       G A G G G     C
    G       + | | |                 T T
    C       T G G T
      C G A        G     TGTGGGGGTTATACTCCACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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