The detailed information of tRNA gene sequence


Sequence ID>W131110086
Genome IDAPIY01000049
Search identical group
Phylum/ClassCyanobacteriota
SpeciesDolichospermum circinale AWQC131C [APIY]
Start position on genome 1122
End posion on genome 1194
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgtgaataa
tRNA gene sequence 
GCGCTCTTGGCCGATTGGGGAGGCAACGAACTCATAATTCGTCTTCAGGCTGGTTCAATT
CCAGCAGGGCGCAttt
Downstream region at tRNA end position 
tacgcattta
Secondary structure (Cloverleaf model)
>W131110086	Met	CAT
                   a      Attt tacgcattta
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T T
                    T     C G A C C     A
        T A        G      | | | | |     A
      T     G C C G       G C T G G     C
      G       | | |                 T T
      G     A G G C
        G G        A     CTTCAG
                    A - T
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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