The detailed information of tRNA gene sequence


Sequence ID>W131110603
Genome IDAPKF01000042
Search identical group
Phylum/ClassAtribacterota
SpeciesCandidatus Caldatribacterium californiense OP9 bacterium OP9-cSCG [APKF]
Start position on genome 22016
End posion on genome 22110
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agacgaaaag
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGACGAAGGCGCCCGCCTGGAGAGCGGGTAGGCAGGGGTTGAGC
CTGCCTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gatttgcctc
Secondary structure (Cloverleaf model)
>W131110603	Ser	GGA
                   g      GCCA gatttgcctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    A       A G G C
      C G A        G     TAGGCAGGGGTTGAGCCTGCCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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