The detailed information of tRNA gene sequence


Sequence ID>W131110604
Genome IDAPKF01000042
Search identical group
Phylum/ClassAtribacterota
SpeciesCandidatus Caldatribacterium californiense OP9 bacterium OP9-cSCG [APKF]
Start position on genome 33574
End posion on genome 33500
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tatttttgga
tRNA gene sequence 
GCCGGTGTAGCTCAATGGCAGAGCAGCGGAATCGTAATCCGCAGGTTGTCCGTTCAAGTC
GGATCGCCGGCTCCA
Downstream region at tRNA end position 
gaatcttttt
Secondary structure (Cloverleaf model)
>W131110604	Thr	CGT
                   a      TCCA gaatcttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     T A G G C     A
        A A        A      + | | | |     A
      T     C T C G       G T C C G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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