The detailed information of tRNA gene sequence


Sequence ID>W131110605
Genome IDAPKF01000065
Search identical group
Phylum/ClassAtribacterota
SpeciesCandidatus Caldatribacterium californiense OP9 bacterium OP9-cSCG [APKF]
Start position on genome 52
End posion on genome 127
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gggcgttctt
tRNA gene sequence 
GCCGGTGTAGCTCAGCTGGTAGAGCAGCTGACTTGTAATCAGCAGGTCGTCCGTTCGAGT
CGGATCACCGGCTCCA
Downstream region at tRNA end position 
gtgtgtgggg
Secondary structure (Cloverleaf model)
>W131110605	Thr	TGT
                   t      TCCA gtgtgtgggg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T A G G C     A
      C G A        A      + | | | |     G
    T       C T C G       G T C C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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