The detailed information of tRNA gene sequence


Sequence ID>W131110607
Genome IDAPKF01000065
Search identical group
Phylum/ClassAtribacterota
SpeciesCandidatus Caldatribacterium californiense OP9 bacterium OP9-cSCG [APKF]
Start position on genome 230
End posion on genome 304
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cagaatagaa
tRNA gene sequence 
GCCTGCGTAGCTCAGTGGTAGAGCGCACCCTTGGTAAGGGTGAGGTCACCGGTTCGATCC
CGGTCGTAGGCTCCA
Downstream region at tRNA end position 
cttttctttt
Secondary structure (Cloverleaf model)
>W131110607	Thr	GGT
                   a      TCCA cttttctttt
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T
                     C - G
                     G - C          C T
                    T     T G G C C     A
        G A        A      | | | | |     G
      T     C T C G       A C C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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