The detailed information of tRNA gene sequence


Sequence ID>W131110608
Genome IDAPKF01000067
Search identical group
Phylum/ClassAtribacterota
SpeciesCandidatus Caldatribacterium californiense OP9 bacterium OP9-cSCG [APKF]
Start position on genome 5271
End posion on genome 5177
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caatataggt
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGACGAAGGCGCTCGACTCGAAATCGAGTAGGCAAGTGAGAGC
TTGCCTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ggagaagtca
Secondary structure (Cloverleaf model)
>W131110608	Ser	CGA
                   t      GCCA ggagaagtca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G T G G G     C
  G           | | |                 T T
  A         A G G C
    C G A          G     TAGGCAAGTGAGAGCTTGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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