The detailed information of tRNA gene sequence


Sequence ID>W131110613
Genome IDAPKF01000110
Search identical group
Phylum/ClassAtribacterota
SpeciesCandidatus Caldatribacterium californiense OP9 bacterium OP9-cSCG [APKF]
Start position on genome 6339
End posion on genome 6265
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnngt
tRNA gene sequence 
GGGTCCATAGCTCAGCGGTAGAGCAGCCGGCTCATAACCGGTCGGTCCCTGGTTCGAATC
CGGGTGGACCCACCA
Downstream region at tRNA end position 
ttttctctcc
Secondary structure (Cloverleaf model)
>W131110613	Met	CAT
                   t      ACCA ttttctctcc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | + | |     G
      C     C T C G       C C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     CGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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