The detailed information of tRNA gene sequence


Sequence ID>W131110615
Genome IDAPKF01000123
Search identical group
Phylum/ClassAtribacterota
SpeciesCandidatus Caldatribacterium californiense OP9 bacterium OP9-cSCG [APKF]
Start position on genome 10844
End posion on genome 10751
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccctgtcct
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCAATCGCCTGCTAAGCGATTAGGCGGACCAAAATC
CGCCTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gagctccgaa
Secondary structure (Cloverleaf model)
>W131110615	Ser	GCT
                   t      GCCA gagctccgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TAGGCGGACCAAAATCCGCCTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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