The detailed information of tRNA gene sequence


Sequence ID>W131110622
Genome IDAPKF01000142
Search identical group
Phylum/ClassAtribacterota
SpeciesCandidatus Caldatribacterium californiense OP9 bacterium OP9-cSCG [APKF]
Start position on genome 7058
End posion on genome 6984
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agagcagcgt
tRNA gene sequence 
GCGCGGTTAACTCAGCGGAAGAGTGCCATCCTCACACGGTGGAAGTCGCTGGTTCGAATC
CAGCACCGCGCACCA
Downstream region at tRNA end position 
ttttttattc
Secondary structure (Cloverleaf model)
>W131110622	Val	CAC
                   t      ACCA ttttttattc
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     C G A C C     A
        G A        A      | | | | |     G
      C     C T C A       G C T G G     C
      G     | | | |                 T T
      G     G A G T
        A A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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