The detailed information of tRNA gene sequence


Sequence ID>W131110626
Genome IDAPKF01000180
Search identical group
Phylum/ClassAtribacterota
SpeciesCandidatus Caldatribacterium californiense OP9 bacterium OP9-cSCG [APKF]
Start position on genome 49152
End posion on genome 49229
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttctccctgt
tRNA gene sequence 
CGGGGCGTGGCGCAGCCTGGCAAGCGCACCTGCCTTGGGAGCAGGGGGTCGGCCGTTCAA
GTCGGCTCGCCCCGACCA
Downstream region at tRNA end position 
tttctccttc
Secondary structure (Cloverleaf model)
>W131110626	Pro	TGG
                   t      ACCA tttctccttc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T C G G C     A
    C C G A        G      + | | | |     A
  T         C G C G       G G C C G     C
  G         | | | |                 T T
  G         G C G C
    C A A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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