The detailed information of tRNA gene sequence


Sequence ID>W131110628
Genome IDAPKF01000180
Search identical group
Phylum/ClassAtribacterota
SpeciesCandidatus Caldatribacterium californiense OP9 bacterium OP9-cSCG [APKF]
Start position on genome 49733
End posion on genome 49657
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gcttgcctgc
tRNA gene sequence 
GCCCCCATCGTCTAGCCAGGTTAGGACATCGCCCTTTCAAGGCGACGGCAGCGGTTCAAA
TCCGCTTGGGGGCGCCA
Downstream region at tRNA end position 
ggggcttggt
Secondary structure (Cloverleaf model)
>W131110628	Glu	TTC
                   c      GCCA ggggcttggt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C G C C     A
    C C G A        C      | | | | |     A
  A         T C T G       A G C G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          A     CGGC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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