The detailed information of tRNA gene sequence


Sequence ID>W1711069902
Genome IDLSFY01000001
Search identical group
Phylum/ClassBacillota
Species[Clostridium] paradoxum JW-YL-7 = DSM 7308 [LSFY]
Start position on genome 1843564
End posion on genome 1843640
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaataaaat
tRNA gene sequence 
GGCCTGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCAGGTCGCCA
Downstream region at tRNA end position 
aaattcaata
Secondary structure (Cloverleaf model)
>W1711069902	Asp	GTC
                   t      GCCA aaattcaata
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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