The detailed information of tRNA gene sequence


Sequence ID>W1711072890
Genome IDLSIA01000057
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesNovosphingobium sp. CCH12-A3 [LSIA]
Start position on genome 45922
End posion on genome 45998
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gatcagcgat
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCTGGCCGCTCATAACGGCTAGGTCGCGGGTTCAAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
tcattcccac
Secondary structure (Cloverleaf model)
>W1711072890	Met	CAT
                   t      ACCA tcattcccac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTC
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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