The detailed information of tRNA gene sequence


Sequence ID>W131124607
Genome IDAPVI01000004
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium oral taxon 439 oral taxon 439 isolate Chl1 [APVI]
Start position on genome 30560
End posion on genome 30649
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgcttgattc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTTGAACGGGGCGGTCTCGAAAACCGTTAAAGACGCAAGTCTT
TCGAGGGTTCGAATCCCTCCTTCTCCGCTA
Downstream region at tRNA end position 
atatcaaaat
Secondary structure (Cloverleaf model)
>W131124607	Ser	CGA
                   c      GCTA atatcaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TAAAGACGCAAGTCTTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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