The detailed information of tRNA gene sequence


Sequence ID>W131124625
Genome IDAPVI01000063
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium oral taxon 439 oral taxon 439 isolate Chl1 [APVI]
Start position on genome 3658
End posion on genome 3731
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agacgagggt
tRNA gene sequence 
GCGGATATGATGTAGTTGGTGTAGCATAGCAGACTTCAGCTCTGTTTGTACGGGTTCGAG
TCCCGTTATCCGCTatt
Downstream region at tRNA end position 
acactacatg
Secondary structure (Cloverleaf model)
>W131124625	SeC	TCA
                   t      Tatt acactacatg
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     T G C C C     A
    T T G A        G      | | | | |     G
  G         T G T A       A C G G G     C
  G         + | | |                 T T
  T         G C A T
    G T A          A     TTGT
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       C
                  T       G
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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