The detailed information of tRNA gene sequence


Sequence ID>W131124629
Genome IDAPVI01000063
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium oral taxon 439 oral taxon 439 isolate Chl1 [APVI]
Start position on genome 4363
End posion on genome 4438
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
atttttttaT
tRNA gene sequence 
GCTCTCGTGGTCTAGTGGTTTAGGACGCCACCCTCTCACGGTGGAAATCGAGGGTTCGAG
TCCCTCCGGGAGCGAgt
Downstream region at tRNA end position 
gtttattatt
Secondary structure (Cloverleaf model)
>W131124629	Glu	CTC
                   T      GAgt gtttattatt
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       T C T G       G A G G G     C
    G       + | | |                 T T
    T       G G A C
      T T A        G     AAATC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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