The detailed information of tRNA gene sequence


Sequence ID>W131124631
Genome IDAPVI01000071
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium oral taxon 439 oral taxon 439 isolate Chl1 [APVI]
Start position on genome 3450
End posion on genome 3523
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
atgtactgtt
tRNA gene sequence 
GCCCTCGTAGCTCAATGGATAGAGTCGTTGACTTCGAATCAAAAGGTTGGGGGTTCGAGT
CCCTCCGGGGGCGCtt
Downstream region at tRNA end position 
gagtaaaccc
Secondary structure (Cloverleaf model)
>W131124631	Arg	TCG
                   t      GCtt gagtaaaccc
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | +                 T T
    A       G A G T
      T A          C     AGGTT
                    G   A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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